Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATGTACCGAGCAAATGCAAG
((((((((.((((((((((((&)))))))).)))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030979
GeneSymbolPABPC3
Binding site2100,2125
Score0.923
Seed1
Au0.632
Energy-20.9
Binding len25
Me-4.994
Phylopstem1.4843528461538464
Phylopflank2.02294137015
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end8
Position3UTR
2D Structure