Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTGTAGCTGTAC
.(((((((((((((.......&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_030979
GeneSymbolPABPC3
Binding site1874,1888
Score1.0
Seed1
Au0.515
Energy-19.6
Binding len14
Me-4.762
Phylopstem3.4331781538461543
Phylopflank3.20264065765
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure