Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGGGGATGGGTGGGTTATTAATGGGAGGTATGGGGGGTTTA
(((((((.(((((((((((((&.))))))..........))))).)).))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_031157
GeneSymbolHNRNPA1
Binding site3218,3263
Score0.846
Seed1
Au0.5
Energy-27.2
Binding len34
Me-6.251
Phylopstem1.1460414083333332
Phylopflank1.078395515
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure