Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTGCAGGTCTTGCCAGT
..((((((.....((((((((.&)))))))).....)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_031200
GeneSymbolCCR9
Binding site1853,1873
Score0.846
Seed1
Au0.5
Energy-19.7
Binding len20
Me-14.717
Phylopstem-0.61856485
Phylopflank-0.09516755125000002
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure