Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTACCATCTGGGTATTGGCAGCTGCT
..(((((((((((.(((((((&))))))).))).........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_031200
GeneSymbolCCR9
Binding site646,675
Score1.0
Seed1
Au0.559
Energy-21.7
Binding len29
Me-5.814
Phylopstem1.9759909800000002
Phylopflank1.9675276249999996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure