Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCTACAACTGCATTTTGTTGGTGCAGA
(((((.(((((((((((.((.&)).)))))))))).......).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_031200
GeneSymbolCCR9
Binding site945,973
Score0.846
Seed0
Au0.529
Energy-21.1
Binding len28
Me-5.839
Phylopstem2.513867322222222
Phylopflank1.70347908
Longest consecutive pairings10
Position of longest consecutive pairings15
Pairings in 3prime end6
PositionCDS
2D Structure