Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCTTCCACAGTTGCC
..(((((((.((..(.(((((&))))))..)).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_031200
GeneSymbolCCR9
Binding site1056,1075
Score0.949
Seed1
Au0.485
Energy-20.7
Binding len19
Me-8.579
Phylopstem4.9501644
Phylopflank2.504086835
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure