Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGATCAACGGACACTGGCTGCAGCTGCC
..((((((((((((.......&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330785
GeneSymbolSOX5
Binding site816,846
Score1.0
Seed1
Au0.412
Energy-22.1
Binding len14
Me-5.925
Phylopstem1.0676195833333333
Phylopflank1.2069273675
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure