Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACCCTGTTCAGCTGATCCCAACTACCATGGCAGCTGCT
..((((((((.((.(((.((.&.))...))).)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330785
GeneSymbolSOX5
Binding site900,942
Score0.923
Seed1
Au0.412
Energy-22.1
Binding len22
Me-8.639
Phylopstem1.6871391249999999
Phylopflank1.0682887187500003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure