Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACATCAACTGCCGGGA
.(((((((....((((((....&))))))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_031205
GeneSymbolCABP1
Binding site660,678
Score0.846
Seed1
Au0.441
Energy-18.8
Binding len18
Me-12.264
Phylopstem5.379726142857143
Phylopflank6.174813175
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure