Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGACCCAGCTGCC
..(((((((.((((...((((&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_031212
GeneSymbolSLC25A28
Binding site415,431
Score0.923
Seed1
Au0.397
Energy-21.4
Binding len16
Me-7.168
Phylopstem4.357340857142857
Phylopflank5.41094011375
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure