Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCGGCTTGCTCATATGGAACCAGTAGTGGCAGC
((((.((((((((((((((((&)))))))))))................))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_031219
GeneSymbolHDHD3
Binding site1848,1886
Score0.846
Seed0
Au0.471
Energy-21.3
Binding len38
Me-8.057
Phylopstem-0.354096
Phylopflank-0.19744349999999988
Longest consecutive pairings11
Position of longest consecutive pairings27
Pairings in 3prime end8
PositionCDS
2D Structure