Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGCAACAACTGGAGCTGTAGT
((((((((.(((((((...((&))...))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_031220
GeneSymbolPITPNM3
Binding site5682,5704
Score0.885
Seed1
Au0.485
Energy-22.1
Binding len22
Me-4.994
Phylopstem5.145110000000001
Phylopflank3.8252979087500005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure