Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCGACCGCAAGCCCAAG
(((..(((((((((((.((((&))))))))))))).)).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_031220
GeneSymbolPITPNM3
Binding site3306,3327
Score0.846
Seed0
Au0.368
Energy-21.8
Binding len21
Me-11.089
Phylopstem0.4507655375000001
Phylopflank0.3758366350000001
Longest consecutive pairings13
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure