Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTATAGGTACTTTCAGCCATTTGGCTTTGGGCCCCGTGGCTGTG
..((((((((((((((((((.&))))))))...........................)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_031226
GeneSymbolCYP19A1
Binding site1515,1561
Score0.846
Seed1
Au0.456
Energy-21.0
Binding len46
Me-4.957
Phylopstem0.26655975155555556
Phylopflank0.08839802249999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure