Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCATTATGAAGCCTGGTA
(((.(((....(((((((((..&))))))))).....))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_031243
GeneSymbolHNRNPA2B1
Binding site2835,2857
Score0.923
Seed0
Au0.603
Energy-17.3
Binding len22
Me-14.407
Phylopstem4.848134999999999
Phylopflank3.4091996625000007
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end6
Position3UTR
2D Structure