Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTCTGTTGTATGTTGGA
..(((((((((((((.(((...&))).))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_031263
GeneSymbolHNRNPK
Binding site2639,2657
Score0.846
Seed1
Au0.691
Energy-15.7
Binding len18
Me-5.19
Phylopstem5.968685923076923
Phylopflank4.636991961125
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure