Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCTGCTGTTGCCGCTCCTGCAGCCGCAGCTCCTGCAAC
((((((((((((((((.(((.&.)))))))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_031267
GeneSymbolCDK13
Binding site392,433
Score0.923
Seed1
Au0.25
Energy-28.4
Binding len24
Me-3.938
Phylopstem1.7825493842105264
Phylopflank1.1459255774999997
Longest consecutive pairings15
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure