Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCAGCAGCCGCCGCTGCT
..(((((.((((((((.(((.&)))..)))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_031267
GeneSymbolCDK13
Binding site381,401
Score1.0
Seed0
Au0.279
Energy-26.7
Binding len20
Me-7.271
Phylopstem1.4980746000000003
Phylopflank1.5008027849999999
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure