Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACCCCCAAGTCACAGGTGACTCAGCAGTGACCCTGTGTGCCAGGC
.(((((((((((..((......&.))..))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_031268
GeneSymbolPDPK1
Binding site2907,2954
Score0.923
Seed1
Au0.441
Energy-20.9
Binding len17
Me-5.939
Phylopstem-0.7767894727272726
Phylopflank-0.25392089500000004
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure