Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGACTGGAGCTGTAGC
((((((((.(((((...((((&))))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_031277
GeneSymbolRNF17
Binding site3192,3211
Score1.0
Seed1
Au0.574
Energy-21.0
Binding len19
Me-5.962
Phylopstem2.578374
Phylopflank2.40141879875
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure