Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCGTGGCTGCAGG
((((((((((((((((..(((&.))).)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_031284
GeneSymbolADPGK
Binding site1234,1281
Score0.846
Seed1
Au0.309
Energy-29.4
Binding len22
Me-3.938
Phylopstem3.2174721875
Phylopflank2.42201884125
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure