Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGCAGTGCAGCTGCC
..(((((((((..(((..((.&)).))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_031286
GeneSymbolSH3BGRL3
Binding site8,25
Score0.846
Seed1
Au0.204
Energy-20.7
Binding len17
Me-9.593
Phylopstem0.9702823777777775
Phylopflank0.83199485
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure