Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCATTGTAGAATTTGATTTAAAATTTAGAACAAGCTGTCAGGTA
(((((((((((((((((.....&)))))))))...........................)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_031292
GeneSymbolPUS7L
Binding site11201,11246
Score0.846
Seed1
Au0.706
Energy-18.4
Binding len45
Me-3.938
Phylopstem-0.0758885931818182
Phylopflank-0.106715025
Longest consecutive pairings9
Position of longest consecutive pairings36
Pairings in 3prime end3
Position3UTR
2D Structure