Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTCTTGCTATGTTGTCCAGGC
.(((((...(((((((((....&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_031296
GeneSymbolRAB33B
Binding site1210,1233
Score0.923
Seed0
Au0.485
Energy-16.5
Binding len16
Me-8.707
Phylopstem-0.10278522222222225
Phylopflank0.20136036875000007
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure