Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCGCCGTGCCAGGA
.((((((((....(((((....&)))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_031300
GeneSymbolMXD3
Binding site362,378
Score0.846
Seed1
Au0.353
Energy-18.2
Binding len16
Me-12.497
Phylopstem-0.52053575
Phylopflank0.55139372375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure