Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCAAGGCCGTTGGCTGCAGC
((((((((((((((....(((&)))....)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_031301
GeneSymbolAPH1B
Binding site1593,1616
Score0.872
Seed1
Au0.382
Energy-22.1
Binding len23
Me-4.906
Phylopstem0.06287010666666666
Phylopflank-0.10003653125000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure