Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATGGCGACAGCTGCAT
.((((((((..(((((.....&)))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_031314
GeneSymbolHNRNPC
Binding site2174,2190
Score1.0
Seed1
Au0.588
Energy-18.2
Binding len16
Me-7.861
Phylopstem2.5881605
Phylopflank3.4433085837500004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure