Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCTTGTGACGGCTGCAAA
(((((((((((...((.(((.&)))))...)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_031409
GeneSymbolCCR6
Binding site1043,1064
Score0.962
Seed1
Au0.529
Energy-19.3
Binding len21
Me-9.43
Phylopstem0.7992897499999999
Phylopflank2.0372818812499998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure