Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTATCAAACGGCTTACAGCTGTAT
.((((((((.(((((((((((&)))))......))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001366665
GeneSymbolSLAIN1
Binding site1236,1264
Score0.846
Seed1
Au0.544
Energy-20.1
Binding len28
Me-5.036
Phylopstem2.4037243270588236
Phylopflank2.7981520298750002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure