Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAACAAAGCTGCAGCTTCTGGGATAATGGGTCGCAGT
((((((((((((((((..(((&)))..)))..)))))))))................)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001366665
GeneSymbolSLAIN1
Binding site1284,1324
Score0.923
Seed1
Au0.485
Energy-19.8
Binding len40
Me-3.938
Phylopstem2.883366751764706
Phylopflank3.5255736161250004
Longest consecutive pairings9
Position of longest consecutive pairings21
Pairings in 3prime end6
PositionCDS
2D Structure