Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGACCAGCTCAC
.((.(((((.(..((((((((&))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_031422
GeneSymbolCHST9
Binding site4051,4070
Score0.923
Seed0
Au0.544
Energy-19.9
Binding len19
Me-12.704
Phylopstem-0.5889915375
Phylopflank-0.09505532937499998
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure