Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTTCATGGTTCATGTCTGCCAGGA
.(((((((.(((..........&.))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_031431
GeneSymbolCOG3
Binding site1210,1234
Score0.846
Seed1
Au0.574
Energy-16.0
Binding len13
Me-7.964
Phylopstem7.1744054285714265
Phylopflank5.569483366249998
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure