Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCGGCAACTGCATATAAGACAATAAAAACAAAGCTGCC
..(((((((((((((((((((&)))))...)))))))))....................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_031431
GeneSymbolCOG3
Binding site2340,2383
Score0.923
Seed1
Au0.588
Energy-22.0
Binding len43
Me-4.957
Phylopstem3.927898295238095
Phylopflank5.2695496437500005
Longest consecutive pairings9
Position of longest consecutive pairings26
Pairings in 3prime end8
PositionCDS
2D Structure