Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACGGCTGAAATTCCTCAATGATTCAGAGCAGGTGGCCAGGG
.((((((.(((..(((......&.))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_031434
GeneSymbolTMUB1
Binding site598,641
Score1.0
Seed1
Au0.412
Energy-16.4
Binding len15
Me-10.743
Phylopstem3.3590614666666667
Phylopflank2.3087046974999996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure