Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGCCTAGGCTGCGGCCCTTCACTGCTGTGCTGGGTTC
.(((((((((((((...((((&))))...))))))))..................))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_031445
GeneSymbolAMMECR1L
Binding site2927,2966
Score0.846
Seed1
Au0.382
Energy-23.5
Binding len39
Me-4.762
Phylopstem2.010578580645161
Phylopflank2.2993979849999997
Longest consecutive pairings8
Position of longest consecutive pairings24
Pairings in 3prime end5
Position3UTR
2D Structure