Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAAAACTAGAGATCAACTTTCTCAGCTGCAAA
(((((((((.(((((((((((&))))))...........)))))....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142498
GeneSymbolSIRT1
Binding site3002,3038
Score0.846
Seed1
Au0.618
Energy-21.3
Binding len36
Me-5.18
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure