Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGCCGAGCCTGCAGCTGTT
..((((((((((((((.((((&)))).))..)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142502
GeneSymbolPPP1R13L
Binding site925,948
Score0.872
Seed1
Au0.338
Energy-23.3
Binding len23
Me-4.957
Phylopstem-0.22383888235294114
Phylopflank0.6389620150000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure