Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCAGGACATGGTGCTGCAGCTGTG
..((((((((((((((..(((&))).....)))....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142503
GeneSymbolSTARD8
Binding site2793,2820
Score0.808
Seed1
Au0.382
Energy-21.1
Binding len27
Me-4.957
Phylopstem-0.6084991111111111
Phylopflank0.0012773937499999995
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure