Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAGCCTCCTGAGCAGCTGGGAC
((.(((((((((..(((((((&)))))).)..))...))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142524
GeneSymbolBHLHB9
Binding site4496,4522
Score0.846
Seed0
Au0.456
Energy-21.7
Binding len26
Me-7.641
Phylopstem-0.084285375
Phylopflank-0.223719165
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end7
Position3UTR
2D Structure