Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGCAATGGATCATGTCCATGCCAGGTG
(((((((((...((((.(((((&.)))))))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001142529
GeneSymbolBHLHB9
Binding site3203,3232
Score0.846
Seed1
Au0.632
Energy-17.5
Binding len22
Me-11.352
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure