Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGTGACTGCAGAACTGACAGT
(((((((((((((((((((((&)))))))))))))))..))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142530
GeneSymbolBHLHB9
Binding site346,371
Score0.846
Seed1
Au0.618
Energy-19.0
Binding len25
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings10
Pairings in 3prime end8
Position5UTR
2D Structure