Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCGCAAGGCTGTG
..((((((((((((((.....&)))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142532
GeneSymbolSH2D3C
Binding site687,704
Score0.923
Seed1
Au0.397
Energy-22.1
Binding len17
Me-4.957
Phylopstem2.3624680000000002
Phylopflank2.5746587125
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end3
Position5UTR
2D Structure