Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCCATCCGCAGCTGTG
..((((((((((.((......&.)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142532
GeneSymbolSH2D3C
Binding site945,963
Score0.846
Seed1
Au0.309
Energy-21.9
Binding len15
Me-6.479
Phylopstem3.30535984
Phylopflank4.3779899125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure