Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATTCAGCTGGCGGCCGAGCTGCGGG
((((((((.(((((((..(((&.))).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142533
GeneSymbolSH2D3C
Binding site1672,1700
Score1.0
Seed1
Au0.382
Energy-24.2
Binding len21
Me-4.994
Phylopstem1.8561674975
Phylopflank1.3448028617499999
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure