Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATTCAGCTGGCGGCCGAGCTGCGGG
((((((((.(((((((..(((&.))).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142534
GeneSymbolSH2D3C
Binding site1644,1672
Score1.0
Seed1
Au0.382
Energy-24.2
Binding len21
Me-4.994
Phylopstem1.92798925
Phylopflank1.7541815490000001
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure