Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCGCACCTCCTCACCAAATACGCTGAGCAGCTGCT
..(((((((((((((((((((&)))))))).)))...................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142544
GeneSymbolCTF1
Binding site121,161
Score1.0
Seed1
Au0.412
Energy-26.3
Binding len40
Me-4.957
Phylopstem1.866458274358974
Phylopflank1.60380470625
Longest consecutive pairings8
Position of longest consecutive pairings32
Pairings in 3prime end8
PositionCDS
2D Structure