Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGGCTGCCCAGCTGCC
..(((((((.(((.((..((.&))..)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142547
GeneSymbolRPUSD3
Binding site857,875
Score0.949
Seed1
Au0.324
Energy-20.2
Binding len18
Me-7.056
Phylopstem2.051492428571428
Phylopflank1.8378907300000003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure