Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCAGCCATGGCTGCAT
.((((((((.((((((.(((.&))).)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142548
GeneSymbolRAD54L
Binding site640,660
Score0.846
Seed1
Au0.412
Energy-25.7
Binding len20
Me-5.036
Phylopstem6.66748825
Phylopflank5.03763630125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure