Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACAACATTGCAGTTA
....(((((((((((((((..&))))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142549
GeneSymbolDDX4
Binding site2300,2318
Score0.846
Seed0
Au0.676
Energy-18.0
Binding len18
Me-9.547
Phylopstem0.4862042811764707
Phylopflank0.7575725470000001
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end6
Position3UTR
2D Structure